Goal of Course:
To introduce teachers to
the theory and practice of modern molecular biotechnology and bioinformatics,
particularly
as it relates to human health
and welfare; to offer teachers the skills to develop exercises that
could be used in the classroom,
particularly exercises that
make use of the vast array of online resources.
Types of Activities:
The course will be comprised
of three types of activities:
lecture topics that deal
with current topics including basic molecular genetics, the human genome
project, and implications and
ramifications of biotechnology
and bioinformatics
online exercises that
introduce teachers to biotechnology resources such as NCBI, Biology Workbench,
the HHMI site, and the
Cold Spring Harbor site
laboratory exercises that
will illustrate basic concepts in molecular biotechnology. Each teacher
will amplify their own
mitochondrial DNA, sequence
the resulting DNA fragment and analyze the sequence
Week 1:
Lecture Topic:
Overview of basic molecular
genetics (Chapter 1, Campbell text)
Online Computer Exercise:
Summary of online resources
related to molecular biology and biotechnology
Detailed tour of
National Center for Biotechnology Information Online NCBI Resources
Wet Lab Exercise:
Extraction of DNA (from
various foods)
Run DNA on gel to visualize
Week 2:
Lecture Topics:
Overview of the Human
(and Other) Genome Projects: (Chapters 2 & 3, Campbell)
Online Computer
Exercises:
Introduction to Biology
Workbench logging in and completing the sickle cell anemia
tutorial
Laboratory Topics:
Isolation of your DNA
from buccal cells
Setting up the Polymerase
Chain Reaction (PCR) to amplify mitochondrial DNA
Week 3:
Lecture Topics:
Overview of Genome Expression
(Chapters 4-6, Campbell)
Computer Exercises:
Exercises from Campbell
disk
Laboratory Topics:
Run out PCR product on
gel to determine if the reaction was successful
Set up DNA sequencing
reaction
Week 4:
Lecture Topics:
Broader Applications of
Genomics (Chapters 10-12, Campbell)
Online and Laboratory
Exercises:
Analysis of your mitochondrial
DNA using online tools. Here we will use NCBI tools and the
Cold Spring Harbor Laboratory
site to analyze your
DNA and compare it with other mitochondrial DNA sequences.